Carotenoids obi
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                            (Actinobacteria)
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☀ Pathway reconstructed carotenoids:       [  Search similar carotenogenesis pathway constructing organisms  ]  
  1. CA00309 (β-Carotene)
  2. CA00568 (Bisdehydro-β-carotene-2-carboxylic acid)
  3. CA00656 (3,4-Diketo-α-carotene)
  4. CA00919 (Monoanhydrobacterioruberin)
  5. CA00921 (Haloxanthin)
  6. CA00923 (Bacterioruberin)
  7. CA01004 ((5Z)-Bacterioruberin)
  8. CA01005 ((9Z)-Bacterioruberin)
  9. CA01006 ((13Z)-Bacterioruberin)
  10. CA00924 (Bacterioruberin monoglucoside)
☀ Pathway unconstructed carotenoids: None
☀ Lycopene biosynthesis type: Bacterial type (Ref.690)

  ☀ CA00043 (Lycopene) biosynthesis pathway

   Path: CA00189 (Prephytoene pyrophosphate (diphosphate)) -> CA00060 (Phytoene) -> CA00058 ((all-E)-Phytofluene) -> CA00051 (ζ-Carotene) -> CA00047 (Neurosporene) -> CA00043 (Lycopene)

   See: CB000005 (Bacterial and fungal pathway: CA00189 -> CA00060 -> CA00058 -> CA00051 -> CA00047 -> CA00043)

   Necessary enzymes for those reactions in theory: CrtB(2.5.1.32), CitPsy(2.5.1.32), AtPSY(2.5.1.32) (CR00277: CA00189 -> CA00060) --> Crtlb(1.3.99.28), CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.99.29), Crtla(1.3.99.29) (CR00389: CA00060 -> CA00058) --> CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.5.5, 1.3.99.29), Crtla(1.3.99.29) (CR00115: CA00058 -> CA00051) --> PDS(1.3.5.5, 1.3.99.29), CitPDS1(1.3.5.5), BoPDS(1.3.5.5), CrtI(1.3.5.6, 1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00136: CA00051 -> CA00047) --> CrtI(1.3.5.6, 1.3.99.30, 1.3.99.31), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6), Crtlb(1.3.99.26) (CR00132: CA00047 -> CA00043)




  ☀ CA00309 (β-Carotene) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene)

   See: CB000081 (Knwon path in general: CA00043 -> CA00191 -> CA00309)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309)




  ☀ CA00568 (Bisdehydro-β-carotene-2-carboxylic acid) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00384 (Zeaxanthin diglucoside) -> CA00319 (3,4,3',4'-Bisdehydro-β-carotene) -> CA00568 (Bisdehydro-β-carotene-2-carboxylic acid)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000028 (Knwon path in general: CA00328 -> CA00384), Proposed reaction (CA00384 -> CA00319), Proposed reaction (CA00319 -> CA00568)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> CrtX (CR00299: CA00328 -> CA00384) --> unknown (CA00384 -> CA00319) --> unknown (CA00319 -> CA00568)




  ☀ CA00656 (3,4-Diketo-α-carotene) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00256 (4-Keto-γ-carotene) -> CA00655 (Phoenicopterone) -> CA00656 (3,4-Diketo-α-carotene)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000138 (Knwon path in Myxococcus (bacterium): CA00191 -> CA00256), similar to CR00376: CA00191 -> CA00587 (proposed reaction: CA00256 -> CA00655), Proposed reaction (CA00655 -> CA00656)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> unknown (CA00191 -> CA00256) --> unknown (CA00256 -> CA00655) --> unknown (CA00655 -> CA00656)




  ☀ CA00921 (Haloxanthin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00921 (Haloxanthin)

   See: CB000097 (Bacterial pathway: CA00043 -> CA01163), CB000097 (Bacterial pathway: CA01163 -> CA00907), CB000097 (Bacterial pathway: CA00907 -> CA01194), CB000097 (Bacterial pathway: CA01194 -> CA00916), CB000097 (Bacterial pathway: CA00916 -> CA00919), Proposed reaction (CA00919 -> CA00921)

   Necessary enzymes for those reactions in theory: LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> unknown (CA00919 -> CA00921)




  ☀ CA00923 (Bacterioruberin) biosynthesis pathway

   Path: CA00060 (Phytoene) -> CA00058 ((all-E)-Phytofluene) -> CA00051 (ζ-Carotene) -> CA00047 (Neurosporene) -> CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00923 (Bacterioruberin)

   See: CB000097 (Bacterial pathway: CA00060 -> CA00058 -> CA00051 -> CA00047 -> CA00043 -> CA01163 -> CA00907 -> CA01194 -> CA00916 -> CA00919 -> CA00923)

   Necessary enzymes for those reactions in theory: Crtlb(1.3.99.28), CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.99.29), Crtla(1.3.99.29) (CR00389: CA00060 -> CA00058) --> CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.5.5, 1.3.99.29), Crtla(1.3.99.29) (CR00115: CA00058 -> CA00051) --> PDS(1.3.5.5, 1.3.99.29), CitPDS1(1.3.5.5), BoPDS(1.3.5.5), CrtI(1.3.5.6, 1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00136: CA00051 -> CA00047) --> CrtI(1.3.5.6, 1.3.99.30, 1.3.99.31), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6), Crtlb(1.3.99.26) (CR00132: CA00047 -> CA00043) --> LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> CruF, C0505 (CR00210: CA00919 -> CA00923)




  ☀ CA01004 ((5Z)-Bacterioruberin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00923 (Bacterioruberin) -> CA01004 ((5Z)-Bacterioruberin)

   See: CB000097 (Bacterial pathway: CA00043 -> CA01163), CB000097 (Bacterial pathway: CA01163 -> CA00907), CB000097 (Bacterial pathway: CA00907 -> CA01194), CB000097 (Bacterial pathway: CA01194 -> CA00916), CB000097 (Bacterial pathway: CA00916 -> CA00919), CB000097 (Bacterial pathway: CA00919 -> CA00923), Proposed reaction (CA00923 -> CA01004)

   Necessary enzymes for those reactions in theory: LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> CruF, C0505 (CR00210: CA00919 -> CA00923) --> unknown (CA00923 -> CA01004)




  ☀ CA01005 ((9Z)-Bacterioruberin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00923 (Bacterioruberin) -> CA01005 ((9Z)-Bacterioruberin)

   See: CB000097 (Bacterial pathway: CA00043 -> CA01163), CB000097 (Bacterial pathway: CA01163 -> CA00907), CB000097 (Bacterial pathway: CA00907 -> CA01194), CB000097 (Bacterial pathway: CA01194 -> CA00916), CB000097 (Bacterial pathway: CA00916 -> CA00919), CB000097 (Bacterial pathway: CA00919 -> CA00923), Proposed reaction (CA00923 -> CA01005)

   Necessary enzymes for those reactions in theory: LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> CruF, C0505 (CR00210: CA00919 -> CA00923) --> unknown (CA00923 -> CA01005)




  ☀ CA01006 ((13Z)-Bacterioruberin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00923 (Bacterioruberin) -> CA01006 ((13Z)-Bacterioruberin)

   See: CB000097 (Bacterial pathway: CA00043 -> CA01163), CB000097 (Bacterial pathway: CA01163 -> CA00907), CB000097 (Bacterial pathway: CA00907 -> CA01194), CB000097 (Bacterial pathway: CA01194 -> CA00916), CB000097 (Bacterial pathway: CA00916 -> CA00919), CB000097 (Bacterial pathway: CA00919 -> CA00923), Proposed reaction (CA00923 -> CA01006)

   Necessary enzymes for those reactions in theory: LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> CruF, C0505 (CR00210: CA00919 -> CA00923) --> unknown (CA00923 -> CA01006)




  ☀ CA00924 (Bacterioruberin monoglucoside) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA01163 (Dihydroisopentenyldehydrorhodopin) -> CA00907 (2-Isopentenyl-3,4-dehydrorhodopin) -> CA01194 (Dihydrobisanhydrobacterioruberin) -> CA00916 (Bisanhydrobacterioruberin) -> CA00919 (Monoanhydrobacterioruberin) -> CA00923 (Bacterioruberin) -> CA00924 (Bacterioruberin monoglucoside)

   See: CB000097 (Bacterial pathway: CA00043 -> CA01163), CB000097 (Bacterial pathway: CA01163 -> CA00907), CB000097 (Bacterial pathway: CA00907 -> CA01194), CB000097 (Bacterial pathway: CA01194 -> CA00916), CB000097 (Bacterial pathway: CA00916 -> CA00919), CB000097 (Bacterial pathway: CA00919 -> CA00923), Proposed reaction (CA00923 -> CA00924)

   Necessary enzymes for those reactions in theory: LyeJ, C0506 (CR00320: CA00043 -> CA01163) --> CrtD, C0507 (CR00126: CA01163 -> CA00907) --> LyeJ, C0506 (CR00323: CA00907 -> CA01194) --> CrtD, C0507 (CR00131: CA01194 -> CA00916) --> CruF, C0505 (CR00209: CA00916 -> CA00919) --> CruF, C0505 (CR00210: CA00919 -> CA00923) --> unknown (CA00923 -> CA00924)



Ref.690 : Enfissi EM, Nogueira M, Bramley PM, Fraser PD, Plant J. 2017 Feb;89(4):774-788. doi: 10.1111/tpj.13428. Epub 2017 Feb 7., "The regulation of carotenoid formation in tomato fruit.", PMID: 27865019 DOI: 10.1111/tpj.13428
Since June 15th, 2015 by Junko Yabuzaki.